Abstract
This paper presents an approach to optimise rough set partition sizes using various optimisation techniques. Three optimisation techniques are implemented to perform the granularisation process, namely, genetic algorithm (GA), hill climbing (HC) and simulated annealing (SA). These optimisation methods maximise the classification accuracy of the rough sets. The proposed rough set partition method is tested on a set of demographic properties of individuals obtained from the South African antenatal survey. The three techniques are compared in terms of their computational time, accuracy and number of rules produced when applied to the Human Immunodeficiency Virus (HIV) data set. The optimised methods results are compared to a well known non-optimised discretisation method, equal-width-bin partitioning (EWB). The accuracies achieved after optimising the partitions using GA, HC and SA are 66.89%, 65.84% and 65.48% respectively, compared to the accuracy of EWB of 59.86%. In addition to rough sets providing the plausabilities of the estimated HIV status, they also provide the linguistic rules describing how the demographic parameters drive the risk of HIV.
| Original language | English |
|---|---|
| Title of host publication | Computational Models For Life Sciences (CMLS '07) - 2007 International Symposium |
| Pages | 248-257 |
| Number of pages | 10 |
| DOIs | |
| Publication status | Published - 2007 |
| Event | 2007 International Symposium on Computational Models for Life Sciences, CMLS '07 - Gold Coast, QLD, Australia Duration: 17 Dec 2007 → 19 Dec 2007 |
Publication series
| Name | AIP Conference Proceedings |
|---|---|
| Volume | 952 |
| ISSN (Print) | 0094-243X |
| ISSN (Electronic) | 1551-7616 |
Conference
| Conference | 2007 International Symposium on Computational Models for Life Sciences, CMLS '07 |
|---|---|
| Country/Territory | Australia |
| City | Gold Coast, QLD |
| Period | 17/12/07 → 19/12/07 |
UN SDGs
This output contributes to the following UN Sustainable Development Goals (SDGs)
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SDG 3 Good Health and Well-being
Keywords
- Bioinformatics application
- Evolutionary optimisation techniques
- HIV modelling
- Rough set theory
ASJC Scopus subject areas
- General Physics and Astronomy
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