Using optimisation techniques to granulise rough set partitions

Bodie Crossingham, Tshilidzi Marwala

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

13 Citations (Scopus)

Abstract

This paper presents an approach to optimise rough set partition sizes using various optimisation techniques. Three optimisation techniques are implemented to perform the granularisation process, namely, genetic algorithm (GA), hill climbing (HC) and simulated annealing (SA). These optimisation methods maximise the classification accuracy of the rough sets. The proposed rough set partition method is tested on a set of demographic properties of individuals obtained from the South African antenatal survey. The three techniques are compared in terms of their computational time, accuracy and number of rules produced when applied to the Human Immunodeficiency Virus (HIV) data set. The optimised methods results are compared to a well known non-optimised discretisation method, equal-width-bin partitioning (EWB). The accuracies achieved after optimising the partitions using GA, HC and SA are 66.89%, 65.84% and 65.48% respectively, compared to the accuracy of EWB of 59.86%. In addition to rough sets providing the plausabilities of the estimated HIV status, they also provide the linguistic rules describing how the demographic parameters drive the risk of HIV.

Original languageEnglish
Title of host publicationComputational Models For Life Sciences (CMLS '07) - 2007 International Symposium
Pages248-257
Number of pages10
DOIs
Publication statusPublished - 2007
Event2007 International Symposium on Computational Models for Life Sciences, CMLS '07 - Gold Coast, QLD, Australia
Duration: 17 Dec 200719 Dec 2007

Publication series

NameAIP Conference Proceedings
Volume952
ISSN (Print)0094-243X
ISSN (Electronic)1551-7616

Conference

Conference2007 International Symposium on Computational Models for Life Sciences, CMLS '07
Country/TerritoryAustralia
CityGold Coast, QLD
Period17/12/0719/12/07

Keywords

  • Bioinformatics application
  • Evolutionary optimisation techniques
  • HIV modelling
  • Rough set theory

ASJC Scopus subject areas

  • General Physics and Astronomy

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