Pitfalls using tributyrin agar screening to detect lipolytic activity in metagenomic studies

Derek Litthauer, Nathlee S. Abbai, Lizelle A. Piater, Esta van Heerden

Research output: Contribution to journalArticlepeer-review

5 Citations (Scopus)

Abstract

The metagenomics approach is an efficient method for obtaining novel biocatalysts and useful genes from uncultured microorganisms within diverse environments. In this study, we constructed a metagenomic library using a South African deep mine biofilm sample. The library was screened for lipolytic activity using LB Tributyrin (TLB). Although we were able to identify 3 diverse esterase enzymes, we found that 70% of the obtained sequence data revealed the presence of enzymes and genes completely unrelated to that of lipolytic enzymes thereby highlighting the limitation of screening with TLB.

Original languageEnglish
Pages (from-to)4282-4285
Number of pages4
JournalAfrican Journal of Biotechnology
Volume9
Issue number27
Publication statusPublished - 5 Jul 2010
Externally publishedYes

Keywords

  • False positives
  • Lipolytic activity
  • Metagenome
  • Tributyrin

ASJC Scopus subject areas

  • Biotechnology
  • Applied Microbiology and Biotechnology
  • Molecular Biology
  • Genetics
  • Agronomy and Crop Science

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