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(E)-N'-(4-chlorobenzylidene)-5-methyl-1H-pyrazole-3-carbohydrazide as a potential PI3Kα targeting scaffold, synthesis, X-ray crystallography, DFT, molecular docking, molecular dynamics simulations, and MMGBSA analysis

  • Issam Ameziane El Hassani
  • , Mustafa Alhaji Isa
  • , Anouar Ameziane El Hassani
  • , Cemile Baydere Demir
  • , Necmi Dege
  • , Abdullah Yahya Abdullah Alzahrani
  • , Abidemi Paul Kappo
  • , M'hammed Ansar
  • , Khalid Karrouchi
  • Mohammed V University in Rabat
  • University of Maiduguri
  • Sidi Mohamed Ben Abdellah University
  • Istanbul Bilim University
  • Ondokuz Mayis University
  • King Khalid University

Research output: Contribution to journalArticlepeer-review

2 Citations (Scopus)

Abstract

Cancer remains a major global health challenge. Targeting the PI3K/Akt/mTOR pathway, particularly PI3Kα, is a promising anticancer strategy. In this study, a novel pyrazole derivative, E-CMPC, was designed, synthesized, and structurally characterized, including ¹H NMR, ¹³C NMR, ESI-MS, and single-crystal X-ray diffraction. Quantum chemical calculations, Molecular docking, molecular dynamics simulations, and MMGBSA analysis indicated favourable binding behaviour and dynamic stability within a PI3K-like catalytic environment, modelled using the VPS34 kinase domain as a structural surrogate. In silico ADMET analysis indicated favorable pharmacokinetic properties and low toxicity. However, the in silico studies were conducted using a class III phosphoinositide 3-kinase (VPS34) catalytic domain as a structural surrogate to explore conserved PI3K family binding features. Therefore, these computational results highlight E-CMPC as a promising in silico lead candidate, warranting further experimental validation as a PI3Kα-targeted anticancer agent.

Original languageEnglish
Article number145569
JournalJournal of Molecular Structure
Volume1359
DOIs
Publication statusPublished - 5 May 2026
Externally publishedYes

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • Cancer
  • MD simulations
  • MMGBSA analysis
  • Molecular docking
  • PI3Kα inhibitor
  • Pyrazole
  • X-ray

ASJC Scopus subject areas

  • Analytical Chemistry
  • Spectroscopy
  • Organic Chemistry
  • Inorganic Chemistry

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