Abstract
We have investigated the structures and stabilities of four different adenine quartets with alkali and halide ions in the gas phase and in water, using dispersion-corrected density functional theory at the BLYP-D/TZ2P level. First, we examine the empty quartets and how they interact with alkali cations and halide anions with formation of adenine quartet-ion complexes. Second, we examine the interaction in a stack, in which a planar adenine quartet interacts with a cation or anion in the periphery as well as in the center of the quartet. Interestingly, for the latter situation, we find that both cations and anions can stabilize a planar adenine quartet in a stack.
| Original language | English |
|---|---|
| Pages (from-to) | 387-397 |
| Number of pages | 11 |
| Journal | Journal of Biological Inorganic Chemistry |
| Volume | 15 |
| Issue number | 3 |
| DOIs | |
| Publication status | Published - Mar 2010 |
| Externally published | Yes |
Keywords
- Adenine quartets
- Anion binding
- Cation binding
- Density functional calculations
- Solvent effects
ASJC Scopus subject areas
- Biochemistry
- Inorganic Chemistry